PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020078
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 217aa    MW: 24529.6 Da    PI: 8.8906
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58446336PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.31.7e-35461372102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k++e++ed+++++++sws+  nsfvv+d+++f++++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++ik
     Ahy020078  46 FLTKTFEVVEDPSTDSIVSWSRARNSFVVWDSHRFSTTILPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLAGQKHLLRTIK 133
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r ++
     Ahy020078 134 RGRN 137
                   9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467853.94E-3442134IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004152.3E-5942135IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.104.7E-3842134IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000565.6E-204669IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004479.4E-3246134IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.6E-208496IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS00434085109IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.6E-2097109IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MAGRMRVKEE EETVVLCGSG PGGSSSSSSV SPQPMEGLHD VGPPPFLTKT FEVVEDPSTD  60
SIVSWSRARN SFVVWDSHRF STTILPRYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG  120
FLAGQKHLLR TIKRGRNVTQ SSTNTIQHGE GGGGGSCVEL GEFGLEGEIE RLRRDRTVLM  180
AEIVKLRQQQ HNSRERICSM ESRLQVTEKK QTQMMTF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B2e-274413427128Heat shock factor protein 1
5d5v_B2e-274413427128Heat shock factor protein 1
5d5v_D2e-274413427128Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170175RLRRDR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935176.11e-160PREDICTED: heat stress transcription factor A-2-like
SwissprotO809823e-99HSFA2_ARATH; Heat stress transcription factor A-2
TrEMBLA0A0B2R8391e-115A0A0B2R839_GLYSO; Heat shock factor protein HSF30
TrEMBLI1JTX51e-115I1JTX5_SOYBN; Heat shock transcription factor HSFA2
STRINGGLYMA04G05500.31e-114(Glycine max)